A novel approach for the discrimination of culture medium from Vascular Endothelial Growth Factor (VEGF) overexpressing colorectal cancer cells

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Walter De Gruyter Gmbh

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info:eu-repo/semantics/openAccess

Özet

Objectives: The expression level of Vascular Endothelial Growth Factor (VEGF) is assumed as a prognostic marker for several tumor types, including colorectal cancer. Therefore, the determination of pre- and post-therapy levels of VEGF appears to have great value in the assessment of tumor prognosis. Enzyme-Linked Immunosorbent Assay (ELISA) is commonly used for the determination of serum or plasma VEGF levels, but the method is costly and time-consuming. In this study, we aimed to describe a rapid and cost-effective analysis method to discriminate VEGF overexpressing colorectal cancer-derived conditioned medium (CM). Methods: Attenuated Total Reflection (ATR)-Fourier Transform Infrared (FTIR) spectroscopy, combined with Principal Component Analysis (PCA) and Linear Discriminant Analysis (LDA), was used to differentiate VEGF over-expressing colorectal cancer cell line CM from CM obtained from the corresponding control cells which express and secrete relatively lower amount of VEGF. Results: Samples belong to VEGF over-expressing colorectal cancer cells were clearly distinguished from the control group with very high PC scores as PC1 + PC2 = 96%. Besides, a 100% accurate distinction between these two groups was achieved by the LDA analysis. Conclusions: ATR-FTIR spectroscopy combined with pattern recognition techniques was able to discriminate CM of VEGF overexpressing colorectal cancer cells with high efficiency and accuracy.

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Anahtar Kelimeler

Attenuated Total Reflection (ATR)-Fourier Transform Infrared (FTIR) spectroscopy, Linear Discriminant Analysis (LDA), pattern recognition, Principal Component Analysis (PCA), Vascular Endothelial Growth Factor (VEGF), VEGF(165)

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Turkish Journal of Biochemistry-Turk Biyokimya Dergisi

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45

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6

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